Publications.

@article{kusumegi2026dissecting,
  title = {Dissecting the gender divide: authorship and acknowledgment in scientific publications},
  author = {Kusumegi, Keigo and Acuna, Daniel E. and Sano, Yukie},
  year = {2026},
  publication_date = {2026-08-08},
  journal = {Scientometrics},
  doi = {10.1007/s11192-026-05712-z},
  url = {https://doi.org/10.1007/s11192-026-05712-z}
}

@article{meguimtsop2026sciintbench,
  title = {SciIntBench: Measuring LLM Compliance with Research Integrity Norms Under Adversarial Framing},
  author = {Meguimtsop, Almene De Meran and Pacheco, Maria Leonor and Acuna, Daniel E.},
  year = {2026},
  publication_date = {2026-05-28},
  journal = {arXiv preprint arXiv:2605.29468},
  doi = {10.48550/arXiv.2605.29468},
  url = {https://arxiv.org/abs/2605.29468}
}

@article{taechoyotin2026remctx,
  title = {REM-CTX: Automated Peer Review via Reinforcement Learning with Auxiliary Context},
  author = {Taechoyotin, Pawin and Acuna, Daniel E.},
  year = {2026},
  publication_date = {2026-03-31},
  journal = {arXiv preprint arXiv:2604.00248},
  doi = {10.48550/arXiv.2604.00248},
  url = {https://arxiv.org/abs/2604.00248}
}

@article{zhou2026widespread,
  title = {Widespread reference missingness disparities in open scholarly metadata},
  author = {Zhou, Huaxia and Liang, Lizhen and Acuna, Daniel E.},
  year = {2026},
  journal = {Quantitative Science Studies},
  volume = {7},
  pages = {53--65},
  doi = {10.1162/qss.a.400},
  url = {https://doi.org/10.1162/qss.a.400}
}

@article{popp2026government,
  title = {Government Funding and the Direction of Academic Energy Research},
  author = {Popp, David and Gregoire-Zawilski, Myriam and Liang, Lizhen and Acuna, Daniel E.},
  year = {2026},
  journal = {NBER Working Paper No. 34856},
  doi = {10.3386/w34856},
  url = {https://doi.org/10.3386/w34856}
}

@article{xu2026beyond,
  title = {Beyond a number game: Flat team structures improve inclusion and performance in diverse scientific teams},
  author = {Xu, Huimin and Sun, Shujing and Liu, Meijun and Zhang, Chenwei and Bu, Yi and Zhang, Yi and Acuna, Daniel E. and Meyer, Eric and Ding, Ying},
  year = {2026},
  journal = {Journal of the Association for Information Science and Technology},
  volume = {77},
  number = {9},
  pages = {1119--1135},
  doi = {10.1002/asi.70083},
  url = {https://doi.org/10.1002/asi.70083}
}

@article{abatayo2026credibility,
  title = {Assessments of Credibility in the Social and Behavioral Sciences},
  author = {Abatayo, Anna Lou and Achakulvisut, Titipat and Acuna, Daniel and Aczel, Balazs and Balaji, Laxmaan and Bandrowski, Anita and Benjamin, Daniel M and Bishop, Michael M and Brase, Gary L and Brown, Andrew W and Bush, Martin and Caverlee, James and Chakravorti, Tatiana and Chen, Yiling and Daley, Macie and Dehghani, Morteza and Dirzo, Mirka and Dreber, Anna and Eckmann, Peter and Errington, Timothy M and Feng, Qizhang and Fidler, Fiona and Field, Samuel and Fox, Nicholas W and Fraleigh, Robert D and Frank, Aaron and Fraser, Hannah and Gentile, James and Giles, C L and Goldfedder, Brandon and Gooch, Phil and Gordon, Michael and Gould, Elliot and Griffin, Christopher and Gulden, Timothy and Haber, Noah and Hahn, Krystal and Holzmeister, Felix and Hu, Xia B and Huang, Yuzhong and Johannesson, Magnus and Kennedy, Brendan and Kline Struhl, Melissa and Kwasnica, Anthony and Lee, Dong-Ho and Lerman, Kristina and Liu, Yang and Pearce, Allegra and Mandema, Isabella and Marcoci, Alexandru and Mawhinney, Brinna and McIntosh, Souad and Mclaughlin, Michael and Menon, Arjun and Miske, Olivia and Mody, Fallon and Morstatter, Fred and Nakshatri, Nishanth S and Nosek, Brian A and Nuijten, Michele B and Pennock, David and Pfeiffer, Thomas and Pipkin, Darien and Pujara, Jay and Rajtmajer, Sarah and Roelandse, Martijn and Russell, Adam and Silverstein, Priya and Singh, Vaibhav and Soderberg, Courtney K and Squicciarini, Anna M and Stankov, Theresa and Suchow, Jordan W and Szaszi, Barnabas and Tran, Louisa and Vesk, Peter A and Vines, Tim and Vorland, Colby J and Wang, Juntao and Wang, Zhuoer and Wilkinson, David P and Wintle, Bonnie and Wu, Jian},
  year = {2026},
  journal = {MetaArXiv},
  url = {https://osf.io/preprints/metaarxiv/7u58q_v1}
}

@article{zhuang2025estimating,
  title = {Estimating the predictability of questionable open-access journals},
  author = {Zhuang, Han and Liang, Lizhen and Acuna, Daniel E.},
  year = {2025},
  publication_date = {2025-08-27},
  journal = {Science Advances},
  volume = {11},
  number = {35},
  pages = {eadt2792},
  doi = {10.1126/sciadv.adt2792},
  url = {https://doi.org/10.1126/sciadv.adt2792}
}

@article{acuna2022predicting,
  title = {Predicting the longevity of resources shared in scientific publications},
  author = {Acuna, Daniel E. and Jian, Jian and Zeng, Tong and Liang, Lizhen and Zhuang, Han},
  year = {2025},
  publication_date = {2025-05-22},
  journal = {Humanities and Social Sciences Communications},
  volume = {12},
  number = {1},
  pages = {698},
  doi = {10.1057/s41599-025-04716-z},
  url = {https://doi.org/10.1057/s41599-025-04716-z}
}

@article{taechoyotin2025remor,
  title = {REMOR: Automated Peer Review Generation with LLM Reasoning and Multi-Objective Reinforcement Learning},
  author = {Taechoyotin, Pawin and Acuna, Daniel E.},
  year = {2025},
  publication_date = {2025-05-16},
  journal = {arXiv preprint arXiv:2505.11718},
  doi = {10.48550/arXiv.2505.11718},
  url = {https://arxiv.org/abs/2505.11718}
}

@article{zhou2022paraphrase,
  title = {Paraphrase Identification with Deep Learning: A Review of Datasets and Methods},
  author = {Zhou, Chao and Qiu, Cheng and Liang, Lizhen and Acuna, Daniel E.},
  year = {2025},
  journal = {IEEE Access},
  volume = {13},
  pages = {65797--65822},
  doi = {10.1109/ACCESS.2025.3556899},
  url = {https://doi.org/10.1109/ACCESS.2025.3556899}
}

@article{Bibal2024,
  title = {RecSOI: recommending research directions using statements of ignorance},
  author = {Bibal, Adrien and Salem, Nourah M. and Cardon, R{\'e}mi and White, Elizabeth K. and Acuna, Daniel E. and Burke, Robin and Hunter, Lawrence E.},
  year = {2024},
  publication_date = {2024-04-22},
  journal = {Journal of Biomedical Semantics},
  volume = {15},
  number = {1},
  pages = {2},
  doi = {10.1186/s13326-024-00304-3},
  url = {https://doi.org/10.1186/s13326-024-00304-3}
}

@article{XU2024103542,
  title = {The impact of heterogeneous shared leadership in scientific teams},
  author = {Xu, Huimin and Liu, Meijun and Bu, Yi and Sun, Shujing and Zhang, Yi and Zhang, Chenwei and Acuna, Daniel E. and Gray, Steven and Meyer, Eric and Ding, Ying},
  year = {2024},
  journal = {Information Processing & Management},
  volume = {61},
  number = {1},
  pages = {103542},
  doi = {10.1016/j.ipm.2023.103542},
  url = {https://www.sciencedirect.com/science/article/pii/S0306457323002790},
  issn = {0306-4573}
}

@article{liang2024complementary,
  title = {The complementary contributions of academia and industry to AI research},
  author = {Liang, Lizhen and Zhuang, Han and Zou, James and Acuna, Daniel E.},
  year = {2024},
  journal = {arXiv preprint arXiv:2401.10268},
  url = {https://arxiv.org/abs/2401.10268}
}

@article{novoa2024science,
  title = {Science Needs You: Mobilizing for Diversity in Award Recognition},
  author = {Novoa-Monsalve, Elizabeth and Patterson, David and Ludi, Stephanie and Acuna, Daniel E},
  year = {2024},
  journal = {Communications of the ACM},
  volume = {67},
  number = {8},
  pages = {18--21},
  publisher = {ACM New York, NY, USA},
  url = {https://dl.acm.org/doi/10.1145/3651150}
}

@inproceedings{taechoyotin2024misti,
  title = {MISTI: Metadata-Informed Scientific Text and Image Representation through Contrastive Learning},
  author = {Taechoyotin, Pawin and Acuna, Daniel},
  year = {2024},
  publication_date = {2024},
  booktitle = {Proceedings of the Fourth Workshop on Scholarly Document Processing (SDP 2024)},
  pages = {155--164},
  doi = {10.18653/v1/2024.sdp-1.15},
  url = {https://aclanthology.org/2024.sdp-1.15/}
}

@inproceedings{taechoyotin2024mamorx,
  title = {MAMORX: Multi-agent Multi-modal Scientific Review Generation with External Knowledge},
  author = {Taechoyotin, Pawin and Wang, Guanchao and Zeng, Tong and Sides, Bradley and Acuna, Daniel E.},
  year = {2024},
  booktitle = {NeurIPS 2024 Workshop on Foundation Models for Science: Progress, Opportunities, and Challenges},
  url = {https://openreview.net/forum?id=frvkE8rCfX}
}

@article{10.1162/qss_a_00332,
  title = {{Incorporating costs and benefits to the evaluation of uncertain research results: applications to cancer research funding}},
  author = {Zhuang, Han and Acuna, Daniel E.},
  year = {2024},
  publication_date = {2024},
  journal = {Quantitative Science Studies},
  pages = {1047--1069},
  doi = {10.1162/qss_a_00332},
  url = {https://doi.org/10.1162/qss_a_00332},
  issn = {2641-3337}
,
  volume = {5}
,
  number = {4}
}

@inproceedings{varasteh2024comparative,
  title = {Comparative Explanations for Recommendation: Research Directions},
  author = {Varasteh, Meysam and McKinnie, Elizabeth and Aird, Amanda and Acuna, Daniel E. and Burke, Robin},
  year = {2024},
  booktitle = {Proceedings of the 11th Joint Workshop on Interfaces and Human Decision Making for Recommender Systems (IntRS 2024), co-located with RecSys 2024},
  url = {https://ceur-ws.org/Vol-3815/paper1.pdf}
}

@inproceedings{leto2024first,
  title = {A First Step towards Measuring Interdisciplinary Engagement in Scientific Publications: A Case Study on NLP+ CSS Research},
  author = {Leto, Alexandria and Roy, Shamik and Hoyle, Alexander and Acuna, Daniel and Pacheco, Mar{\'\i}a Leonor},
  year = {2024},
  booktitle = {Proceedings of the Sixth Workshop on Natural Language Processing and Computational Social Science (NLP+ CSS 2024)},
  pages = {144--158},
  url = {https://aclanthology.org/2024.nlpcss-1.11/}
}

@article{zhuang2023computational,
  title = {A computational analysis of accessibility, readability, and explainability of figures in open access publications},
  author = {Zhuang, Han and Huang, Tzu-Yang and Acuna, Daniel E},
  year = {2023},
  journal = {EPJ Data Science},
  volume = {12},
  number = {1},
  pages = {5},
  publisher = {Springer Berlin Heidelberg},
  url = {https://epjdatascience.springeropen.com/articles/10.1140/epjds/s13688-023-00380-y}
}

@article{acuna2022,
  title = {Author-suggested reviewers rate manuscripts much more favorably: A cross-sectional analysis of the neuroscience section of PLOS ONE},
  author = {Acuna, D E and Teplitskiy, M and Evans, J. and Kording, K.},
  year = {2022},
  publication_date = {2022-12-12},
  journal = {PLOS ONE},
  doi = {10.1371/journal.pone.0273994},
  url = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0273994}
}

@article{keacuna2022,
  title = {A dataset of mentorship in bioscience with semantic and demographic estimations},
  author = {Ke, Q. and Liang, L. and Ding, Y. and David, S V and Acuna, D E},
  year = {2022},
  publication_date = {2022-08-02},
  journal = {Scientific Data},
  volume = {9},
  number = {467},
  doi = {10.1038/s41597-022-01578-x},
  url = {https://www.nature.com/articles/s41597-022-01578-x}
}

@article{liu2022team,
  title = {Team formation and team impact: The balance between team freshness and repeat collaboration},
  author = {Liu, Meijun and Jaiswal, Ajay and Bu, Yi and Min, Chao and Yang, Sijie and Liu, Zhibo and Acuña, Daniel and Ding, Ying},
  year = {2022},
  journal = {Journal of Informetrics},
  volume = {16},
  number = {4},
  pages = {101337},
  doi = {10.1016/j.joi.2022.101337},
  url = {https://doi.org/10.1016/j.joi.2022.101337}
}

@inproceedings{acunaiconference2022,
  title = {Predicting the usage of scientific datasets based on article, author, institution, and journal bibliometrics},
  author = {Acuna, Daniel E. and Yi, Zijun and Liang, Lizhen and Zhuang, Han},
  year = {2022},
  booktitle = {International Conference on Information},
  pages = {42--52},
  doi = {10.1007/978-3-030-96957-8_5},
  url = {https://link.springer.com/chapter/10.1007/978-3-030-96957-8_5}
}

@inproceedings{bu2022workshop,
  title = {International Workshop on Data-driven Science of Science},
  author = {Bu, Yi and Liu, Meijun and Zhai, Yujia and Ding, Ying and Xia, Feng and Acuña, Daniel E. and Zhang, Yi},
  year = {2022},
  booktitle = {Proceedings of the 28th ACM SIGKDD Conference on Knowledge Discovery and Data Mining},
  pages = {4856--4857},
  doi = {10.1145/3534678.3542891},
  url = {https://doi.org/10.1145/3534678.3542891},
  note = {Workshop announcement}
}

@article{zhuangacuna2021,
  title = {Graphical integrity issues in open access publications: detection and patterns of proportional ink violations},
  author = {Zhuang, Han and Huang, Tzu-Yang and Acuna, Daniel Ernesto},
  year = {2021},
  publication_date = {2021-12-13},
  journal = {PloS Computational Biology},
  doi = {10.1371/journal.pcbi.1009650},
  url = {https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009650}
}

@inproceedings{acuna2021mlworkshop,
  title = {Machine Learning and Artificial Intelligence for Science of Science and Computational Discovery: Principles, Applications, and Future Opportunities},
  author = {Acuna, Daniel E. and Zeng, Tong and Zhuang, Han and Liang, Lizhen},
  year = {2021},
  booktitle = {iConference 2021 workshop},
  url = {https://scienceofscience.org/workshops/},
  note = {Workshop description}
}

@article{acuna2021eileen,
  title = {EILEEN: A recommendation system for scientific publications and grants},
  author = {Acuna, Daniel E. and Nagre, Kartik and Matnani, Priya},
  year = {2021},
  journal = {arXiv:2110.09663},
  doi = {10.48550/arXiv.2110.09663},
  url = {https://arxiv.org/abs/2110.09663}
}

@inproceedings{10.1145/3461702.3462616,
  title = {Are AI Ethics Conferences Different and More Diverse Compared to Traditional Computer Science Conferences?},
  author = {Acuna, Daniel E. and Liang, Lizhen},
  year = {2021},
  booktitle = {Proceedings of the 2021 AAAI/ACM Conference on AI, Ethics, and Society},
  pages = {307–315},
  publisher = {Association for Computing Machinery},
  doi = {10.1145/3461702.3462616},
  url = {https://dl.acm.org/doi/pdf/10.1145/3461702.3462616},
  isbn = {9781450384735}
}

@article{zengacuna2020,
  title = {Large-scale author name disambiguation using approximate network structures},
  author = {Zeng, Tong and Acuna, Daniel E},
  year = {2020},
  publication_date = {2020-07-17},
  journal = {International Conference on Computational Social Science},
  doi = {10.5281/zenodo.4403705},
  url = {https://scienceofscience.org/assets/pdf/ic2s2-author_name_disambiguation_zeng_and_acuna.pdf}
}

@article{jas2020pyglmnet,
  title = {Pyglmnet: Python implementation of elastic-net regularized generalized linear models},
  author = {Jas, Mainak and Achakulvisut, Titipat and Idrizović, Aid and Acuna, Daniel and Antalek, Matthew and Marques, Vinicius and Odland, Tommy and Garg, Ravi and Agrawal, Mayank and Umegaki, Yu and Foley, Peter and Fernandes, Hugo and Harris, Drew and Li, Beibin and Pieters, Olivier and Otterson, Scott and De Toni, Giovanni and Rodgers, Chris and Dyer, Eva and Hamalainen, Matti and Kording, Konrad and Ramkumar, Pavan},
  year = {2020},
  publication_date = {2020-03-01},
  journal = {Journal of Open Source Software},
  volume = {5},
  number = {47},
  pages = {1959},
  doi = {10.21105/joss.01959},
  url = {https://joss.theoj.org/papers/10.21105/joss.01959}
}

@article{acuna2020nullmodel,
  title = {Estimating a Null Model of Scientific Image Reuse to Support Research Integrity Investigations},
  author = {Acuna, Daniel E. and Xiang, Ziyue},
  year = {2020},
  publication_date = {2020-02-22},
  journal = {arXiv:2003.00878},
  doi = {10.48550/arXiv.2003.00878},
  url = {https://arxiv.org/abs/2003.00878}
}

@article{achakulvisut2020pubmed,
  title = {Pubmed Parser: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset},
  author = {Achakulvisut, Titipat and Acuna, Daniel E and Kording, Konrad},
  year = {2020},
  publication_date = {2020-02-08},
  journal = {Journal of Open Source Software},
  volume = {5},
  number = {46},
  pages = {1979},
  doi = {10.21105/joss.01979},
  url = {https://joss.theoj.org/papers/10.21105/joss.01979}
}

@article{xiang2020tampering,
  title = {Scientific Image Tampering Detection Based On Noise Inconsistencies: A Method And Datasets},
  author = {Xiang, Ziyue and Acuna, Daniel E.},
  year = {2020},
  publication_date = {2020-01-21},
  journal = {arXiv:2001.07799},
  doi = {10.48550/arXiv.2001.07799},
  url = {https://arxiv.org/abs/2001.07799}
}

@misc{achakulvisut2020neuromatch,
  title = {neuromatch: Algorithms to match scientists},
  author = {Achakulvisut, Titipat and Ruangrong, Tulakan and Acuna, Daniel Ernesto and Wyble, Brad and Goodman, Dan and Kording, Konrad},
  year = {2020},
  url = {https://elifesciences.org/labs/5ed408f4/neuromatch-algorithms-to-match-scientists}
}

@article{acuna2020mentorshipcommentary,
  title = {Some considerations for studying gender, mentorship, and scientific impact: commentary on AlShebli, Makovi, and Rahwan (2020)},
  author = {Acuna, Daniel Ernesto},
  year = {2020},
  journal = {OSF Preprints},
  doi = {10.31219/osf.io/ybfk6},
  url = {https://scholar.archive.org/work/qk62l25nhjcnzck3fhcxdogl2u/access/wayback/https://files.osf.io/v1/resources/ybfk6/providers/osfstorage/5fe01fca149e75061b032ad0?action=download&direct&version=3},
  note = {Archived preprint}
}

@article{zeng2020modeling,
  title = {Modeling citation worthiness by using attention-based bidirectional long short-term memory networks and interpretable models},
  author = {Zeng, Tong and Acuna, Daniel E},
  year = {2020},
  journal = {Scientometrics},
  volume = {124},
  number = {1},
  pages = {399--428},
  publisher = {Springer},
  url = {https://link.springer.com/article/10.1007/s11192-020-03421-9}
}

@article{zeng2020gotfunding,
  title = {GotFunding: A grant recommendation system based on scientific articles},
  author = {Zeng, Tong and Acuna, Daniel E},
  year = {2020},
  journal = {Proceedings of the Association for Information Science and Technology},
  volume = {57},
  number = {1},
  pages = {e323},
  publisher = {Wiley Online Library},
  url = {https://asistdl.onlinelibrary.wiley.com/doi/full/10.1002/pra2.323}
}

@incollection{zeng2020finding,
  title = {Finding datasets in publications: the Syracuse University approach},
  author = {Zeng, Tong and Acuna, Daniel E},
  editor = {Lane, Julia I. and Mulvany, Ian and Nathan, Paco},
  year = {2020},
  booktitle = {Rich Search and Discovery for Research Datasets},
  pages = {158--165},
  publisher = {SAGE},
  doi = {10.5281/zenodo.4402304},
  url = {https://surface.syr.edu/cgi/viewcontent.cgi?article=1194&context=istpub}
}

@article{liang2020don,
  title = {Don't judge a journal by its cover?: Appearance of a Journal's website as predictor of blacklisted Open-Access status},
  author = {Liang, Lizhen and Acuna, Daniel E},
  year = {2020},
  journal = {Proceedings of the Association for Information Science and Technology},
  volume = {57},
  number = {1},
  pages = {e306},
  publisher = {Wiley Online Library},
  url = {https://zenodo.org/record/4403155/files/Liang_L%20AM20.pdf}
}

@article{zeng2020assigning,
  title = {Assigning credit to scientific datasets using article citation networks},
  author = {Zeng, Tong and Wu, Longfeng and Bratt, Sarah and Acuna, Daniel E},
  year = {2020},
  journal = {Journal of Informetrics},
  volume = {14},
  number = {2},
  pages = {101013},
  publisher = {Elsevier},
  url = {https://www.sciencedirect.com/science/article/pii/S1751157719301841}
}

@inproceedings{liang2020artificial,
  title = {Artificial mental phenomena: Psychophysics as a framework to detect perception biases in AI models},
  author = {Liang, Lizhen and Acuna, Daniel E},
  year = {2020},
  booktitle = {Proceedings of the 2020 Conference on Fairness, Accountability, and Transparency},
  pages = {403--412},
  url = {https://dl.acm.org/doi/abs/10.1145/3351095.3375623}
}

@article{liangacuna2020,
  title = {Are author, affiliation, and citation networks predictive of a journal getting blacklisted?},
  author = {Liang, Lizhen and Acuna, Daniel E},
  year = {2020},
  journal = {International Conference on Computational Social Science},
  url = {https://zenodo.org/record/4403394/files/ic2s2_Liang.pdf}
}

@article{zhuangacuna2020,
  title = {An Automatic Misleading Graph Detection Tool},
  author = {Zhuang, Han and Acuna, Daniel E},
  year = {2020},
  journal = {International Conference on Computational Social Science}
}

@article{zhuang2019novelty,
  title = {The effect of novelty on the future impact of scientific grants},
  author = {Zhuang, Han and Acuna, Daniel E.},
  year = {2019},
  journal = {arXiv:1911.02712},
  doi = {10.48550/arXiv.1911.02712},
  url = {https://arxiv.org/abs/1911.02712}
}

@article{lee2019limiting,
  title = {Limiting motor skill knowledge via incidental training protects against choking under pressure},
  author = {Lee, Taraz G and Acuna, Daniel E and Kording, Konrad P and Grafton, Scott T},
  year = {2019},
  journal = {Psychonomic bulletin \& review},
  volume = {26},
  number = {1},
  pages = {279--290},
  publisher = {Springer},
  url = {https://link.springer.com/article/10.3758/s13423-018-1486-x}
}

@inproceedings{acuna2019investigations,
  title = {Helping research misconduct investigations: methods for statistical certainty reporting of inappropriate figure reuse},
  author = {Daniel E. Acuna},
  year = {2019},
  booktitle = {World Conference on Research Integrity, Hong Kong},
  note = {Conference presentation; listed in author CV dated February 1, 2026}
}

@inproceedings{zeng2019dead,
  title = {Dead science: Most resources linked in biomedical articles disappear in eight years},
  author = {Zeng, Tong and Shema, Alain and Acuna, Daniel E},
  year = {2019},
  booktitle = {International Conference on Information},
  pages = {170--176},
  url = {https://link.springer.com/chapter/10.1007/978-3-030-15742-5_16}
}

@article{achakulvisut2019claim,
  title = {Claim Extraction in Biomedical Publications using Deep Discourse Model and Transfer Learning},
  author = {Achakulvisut, Titipat and Bhagavatula, Chandra and Acuna, Daniel and Kording, Konrad},
  year = {2019},
  journal = {arXiv:1907.00962},
  doi = {10.48550/arXiv.1907.00962},
  url = {https://arxiv.org/abs/1907.00962}
}

@article{lienard2018intellectual,
  title = {Intellectual synthesis in mentorship determines success in academic careers},
  author = {Li{\'e}nard, Jean F and Achakulvisut, Titipat and Acuna, Daniel E and David, Stephen V},
  year = {2018},
  publication_date = {2018-11-27},
  journal = {Nature communications},
  volume = {9},
  number = {1},
  pages = {1--13},
  publisher = {Nature Publishing Group},
  doi = {10.1038/s41467-018-07034-y},
  url = {https://www.nature.com/articles/s41467-018-07034-y}
}

@article{teplitskiy2018sociology,
  title = {The sociology of scientific validity: How professional networks shape judgement in peer review},
  author = {Teplitskiy, Misha and Acuna, Daniel and Elamrani-Raoult, A{\"\i}da and K{\"o}rding, Konrad and Evans, James},
  year = {2018},
  journal = {Research Policy},
  volume = {47},
  number = {9},
  pages = {1825--1841},
  publisher = {Elsevier},
  url = {https://www.sciencedirect.com/science/article/pii/S0048733318301598}
}

@article{acuna2018bioscience,
  title = {Bioscience-scale automated detection of figure element reuse},
  author = {Acuna, Daniel E and Brookes, Paul S and Kording, Konrad P},
  year = {2018},
  journal = {BioRxiv},
  pages = {269415},
  publisher = {Cold Spring Harbor Laboratory},
  url = {https://www.biorxiv.org/content/10.1101/269415v3}
}

@inproceedings{shema2017show,
  title = {Show Me Your App Usage and I Will Tell Who Your Close Friends Are: Predicting User's Context from Simple Cellphone Activity},
  author = {Shema, Alain and Acuna, Daniel E},
  year = {2017},
  booktitle = {Proceedings of the 2017 CHI Conference Extended Abstracts on Human Factors in Computing Systems},
  pages = {2929--2935},
  url = {https://dl.acm.org/doi/abs/10.1145/3027063.3053275}
}

@article{achakulvisut2016science,
  title = {Science Concierge: A fast content-based recommendation system for scientific publications},
  author = {Achakulvisut, Titipat and Acuna, Daniel E and Ruangrong, Tulakan and Kording, Konrad},
  year = {2016},
  publication_date = {2016-07-06},
  journal = {PloS ONE},
  volume = {11},
  number = {7},
  pages = {e0158423},
  publisher = {Public Library of Science San Francisco, CA USA},
  doi = {10.1371/journal.pone.0158423},
  url = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0158423}
}

@article{ramkumar2016chunking,
  title = {Chunking as the result of an efficiency computation trade-off},
  author = {Ramkumar, Pavan and Acuna, Daniel E and Berniker, Max and Grafton, Scott T and Turner, Robert S and Kording, Konrad P},
  year = {2016},
  journal = {Nature communications},
  volume = {7},
  number = {1},
  pages = {1--11},
  publisher = {Nature Publishing Group},
  url = {https://www.nature.com/articles/ncomms12176}
}

@article{ethier2016adaptive,
  title = {Adaptive neuron-to-EMG decoder training for FES neuroprostheses},
  author = {Ethier, Christian and Acuna, Daniel and Solla, Sara A and Miller, Lee E},
  year = {2016},
  journal = {Journal of neural engineering},
  volume = {13},
  number = {4},
  pages = {046009},
  publisher = {IOP Publishing},
  url = {https://iopscience.iop.org/article/10.1088/1741-2560/13/4/046009}
}

@article{acuna2015using,
  title = {Using psychophysics to ask if the brain samples or maximizes},
  author = {Acuna, Daniel E and Berniker, Max and Fernandes, Hugo L and Kording, Konrad P},
  year = {2015},
  journal = {Journal of vision},
  volume = {15},
  number = {3},
  pages = {7--7},
  publisher = {The Association for Research in Vision and Ophthalmology},
  url = {https://jov.arvojournals.org/article.aspx?articleid=2213288}
}

@article{lancichinetti2015topic,
  title = {High-Reproducibility and High-Accuracy Method for Automated Topic Classification},
  author = {Lancichinetti, Andrea and Sirer, M. Irmak and Wang, Jane X. and Acuna, Daniel and Körding, Konrad and Nunes Amaral, Luís A.},
  year = {2015},
  journal = {Physical Review X},
  volume = {5},
  number = {1},
  pages = {011007},
  doi = {10.1103/PhysRevX.5.011007},
  url = {https://doi.org/10.1103/PhysRevX.5.011007}
}

@article{acuna2014multifaceted,
  title = {Multifaceted aspects of chunking enable robust algorithms},
  author = {Acuna, Daniel E and Wymbs, Nicholas F and Reynolds, Chelsea A and Picard, Nathalie and Turner, Robert S and Strick, Peter L and Grafton, Scott T and Kording, Konrad P},
  year = {2014},
  journal = {Journal of neurophysiology},
  volume = {112},
  number = {8},
  pages = {1849--1856},
  publisher = {American Physiological Society Bethesda, MD},
  url = {https://journals.physiology.org/doi/full/10.1152/jn.00028.2014}
}

@article{acuna2013future,
  title = {The future h-index is an excellent way to predict scientistsˈ future impact},
  author = {Acuna, Daniel E and Penner, Orion and Orton, Colin G},
  year = {2013},
  journal = {Medical Physics},
  volume = {40},
  number = {11},
  publisher = {Wiley Online Library},
  url = {https://aapm.onlinelibrary.wiley.com/doi/pdfdirect/10.1118/1.4816659}
}

@article{acuna2012predicting,
  title = {Predicting scientific success},
  author = {Acuna, Daniel E and Allesina, Stefano and Kording, Konrad P},
  year = {2012},
  publication_date = {2012-09-12},
  journal = {Nature},
  volume = {489},
  number = {7415},
  pages = {201--202},
  publisher = {Nature Publishing Group},
  doi = {10.1038/489201a},
  url = {https://www.nature.com/articles/489201a}
}

@article{avraham2012toward,
  title = {Toward perceiving robots as humans: Three handshake models face the turing-like handshake test},
  author = {Avraham, Guy and Nisky, Ilana and Fernandes, Hugo L and Acuna, Daniel E and Kording, Konrad P and Loeb, Gerald E and Karniel, Amir},
  year = {2012},
  journal = {IEEE Transactions on Haptics},
  volume = {5},
  number = {3},
  pages = {196--207},
  publisher = {IEEE},
  url = {https://ieeexplore.ieee.org/abstract/document/6185551}
}

@phdthesis{acuna2011rational,
  title = {Rational Bayesian Analysis of Sequential Decision-Making Under Uncertainty In Humans and Machines},
  author = {Acuna, Daniel Ernesto},
  year = {2011},
  school = {University of Minnesota},
  url = {https://dl.acm.org/doi/book/10.5555/2521677}
}

@article{acuna2010structure,
  title = {Structure learning in human sequential decision-making},
  author = {Acuna, Daniel E and Schrater, Paul},
  year = {2010},
  publication_date = {2010-12-02},
  journal = {PLoS computational biology},
  volume = {6},
  number = {12},
  pages = {e1001003},
  publisher = {Public Library of Science San Francisco, USA},
  doi = {10.1371/journal.pcbi.1001003},
  url = {https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1001003}
}

@inproceedings{acuna2010aspiration,
  title = {The rational control of aspiration in learning},
  author = {Acuna, Daniel and Green, C. Shawn and Schrater, Paul},
  year = {2010},
  booktitle = {Computational and Systems Neuroscience 2010},
  doi = {10.3389/conf.fnins.2010.03.00169},
  url = {https://www.frontiersin.org/10.3389/conf.fnins.2010.03.00169/event_abstract},
  note = {Conference abstract}
}

@article{acuna2010people,
  title = {People efficiently explore the solution space of the computationally intractable traveling salesman problem to find near-optimal tours},
  author = {Acuna, Daniel E and Parada, V{\'\i}ctor},
  year = {2010},
  journal = {PloS ONE},
  volume = {5},
  number = {7},
  pages = {e11685},
  publisher = {Public Library of Science San Francisco, USA},
  url = {https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0011685}
}

@inproceedings{acuna2010unbounded,
  title = {Decision-making in unbounded environments using nonparametric Bayesian Reinforcement Learning},
  author = {Daniel E. Acuna and C. Shawn Green and Paul Schrater},
  year = {2010},
  booktitle = {NIPS 2010 Workshop on Bounded-rational analyses of human cognition: Bayesian models, approximate inference, and the brain},
  note = {Workshop presentation; listed in author CV dated February 1, 2026}
}

@inproceedings{schrater2009structure,
  title = {Structure learning in sequential decision making},
  author = {Schrater, Paul and Acuna, Daniel},
  year = {2009},
  booktitle = {Journal of Vision: Vision Sciences Society Annual Meeting Abstracts},
  volume = {9},
  number = {8},
  pages = {829},
  url = {https://jov.arvojournals.org/article.aspx?articleid=2136291},
  note = {Conference abstract}
}

@article{acuna2009improving,
  title = {Improving bayesian reinforcement learning using transition abstraction},
  author = {Acuna, Daniel E and Schrater, Paul},
  year = {2009},
  journal = {Proceedings of the ICML/UAI/COLT Workshop on Abstraction in Reinforcement Learning},
  pages = {1},
  url = {https://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.147.5877&rep=rep1&type=pdf}
}

@inproceedings{acuna2008structure,
  title = {Structure learning in human sequential decision-making},
  author = {Acuna, Daniel E and Schrater, Paul},
  year = {2008},
  booktitle = {Proceedings of the 21st International Conference on Neural Information Processing Systems},
  pages = {1--8},
  url = {https://dl.acm.org/doi/abs/10.5555/2981780.2981781}
}

@inproceedings{acuna2008bayesian,
  title = {Bayesian modeling of human sequential decision-making on the multi-armed bandit problem},
  author = {Acuna, Daniel Ernesto and Schrater, Paul},
  year = {2008},
  booktitle = {Proceedings of the 30th annual conference of the cognitive science society},
  volume = {100},
  pages = {200--300},
  url = {https://core.ac.uk/download/pdf/22874996.pdf}
}